Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm12957-201ENSMUST00000117835 377 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm43818-201ENSMUST00000200605 466 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm10146-201ENSMUST00000072739 309 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4Q8BQZ5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm27682-201ENSMUST00000183930 110 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm16372-201ENSMUST00000073088 450 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4Q8BQZ5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms