Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Gm25911-201ENSMUST00000157621 56 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Map1b-203ENSMUST00000223725 2669 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm3436-201ENSMUST00000179930 840 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco3Q8BQM7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms