Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.69■□□□□ 0.42
Usp54Q8BL06 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm11675-201ENSMUST00000121873 832 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm6407-201ENSMUST00000176468 549 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm23771-201ENSMUST00000178702 110 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm44270-201ENSMUST00000203084 1234 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm18636-201ENSMUST00000218846 1066 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.68■□□□□ 0.42
Usp54Q8BL06 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp54Q8BL06 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm43186-201ENSMUST00000198130 824 ntBASIC17.67■□□□□ 0.42
Usp54Q8BL06 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC17.67■□□□□ 0.42
Usp54Q8BL06 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Usp54Q8BL06 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm15352-201ENSMUST00000118696 270 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm25517-201ENSMUST00000083865 134 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms