Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp2bQ8BJF9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp2bQ8BJF9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms