Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubp1Q811S7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm23363-201ENSMUST00000175024 79 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm18363-201ENSMUST00000221671 730 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Mir339-201ENSMUST00000083659 96 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.55□□□□□ -0.4
Ubp1Q811S7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubp1Q811S7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm8099-201ENSMUST00000200510 742 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Snora73a-201ENSMUST00000082453 205 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.54□□□□□ -0.4
Ubp1Q811S7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ubp1Q811S7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms