Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm18062-201ENSMUST00000208020 547 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm18055-201ENSMUST00000208254 547 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm9396-201ENSMUST00000076703 567 ntBASIC12.37□□□□□ -0.43
Trim50Q810I2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim50Q810I2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim50Q810I2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim50Q810I2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trim50Q810I2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.36□□□□□ -0.43
Trim50Q810I2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim50Q810I2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.36□□□□□ -0.43
Trim50Q810I2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim50Q810I2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim50Q810I2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim50Q810I2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim50Q810I2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim50Q810I2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim50Q810I2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms