Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm14760-201ENSMUST00000121831 999 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm27847-201ENSMUST00000183711 107 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm27375-201ENSMUST00000183799 107 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm19163-201ENSMUST00000223313 780 ntBASIC12.43□□□□□ -0.42
Ccdc116Q80X53 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc116Q80X53 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms