Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Mir874-201ENSMUST00000104769 76 ntBASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Gm27438-201ENSMUST00000183480 110 ntBASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf40bQ80W14 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Gm11531-201ENSMUST00000117614 555 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Gm6447-201ENSMUST00000118905 835 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Gm12502-201ENSMUST00000120197 444 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Gm13665-201ENSMUST00000120830 528 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Gm44262-201ENSMUST00000204969 372 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40bQ80W14 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Gm8385-201ENSMUST00000058999 643 ntBASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40bQ80W14 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40bQ80W14 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms