Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.74□□□□□ -0.37
Usp8Q80U87 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gm8515-201ENSMUST00000194852 576 ntBASIC12.74□□□□□ -0.37
Usp8Q80U87 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.74□□□□□ -0.37
Usp8Q80U87 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.74□□□□□ -0.37
Usp8Q80U87 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.74□□□□□ -0.37
Usp8Q80U87 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp8Q80U87 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Usp8Q80U87 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.73□□□□□ -0.37
Usp8Q80U87 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm28911-201ENSMUST00000188837 117 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm6458-201ENSMUST00000211573 635 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.73□□□□□ -0.37
Usp8Q80U87 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp8Q80U87 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp8Q80U87 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms