Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh19Q80TF3 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh19Q80TF3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm6082-201ENSMUST00000215204 454 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh19Q80TF3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms