Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gm22323-201ENSMUST00000103832 109 ntBASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh8Q7TSK3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh8Q7TSK3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh8Q7TSK3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms