Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mir7677-201ENSMUST00000184226 67 ntBASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Gm23596-201ENSMUST00000104304 132 ntBASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Gm37246-201ENSMUST00000192665 835 ntBASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx55Q6ZPL9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm13888-201ENSMUST00000119148 422 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm9022-201ENSMUST00000182482 992 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm5733-201ENSMUST00000190232 939 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx55Q6ZPL9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx55Q6ZPL9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms