Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd1Q6PIP5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Daam2-202ENSMUST00000224595 1926 ntBASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Mir877-201ENSMUST00000104738 85 ntBASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd1Q6PIP5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm30285-201ENSMUST00000214614 422 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd1Q6PIP5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms