Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gm14058-201ENSMUST00000116082 735 ntBASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gm10179-201ENSMUST00000086233 688 ntBASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Snrnp40Q6PE01 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm11667-201ENSMUST00000119828 486 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm42937-201ENSMUST00000197360 752 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snrnp40Q6PE01 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms