Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm23363-201ENSMUST00000175024 79 ntBASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm19184-201ENSMUST00000196798 928 ntBASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm4768-201ENSMUST00000206199 686 ntBASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Snora73a-201ENSMUST00000082453 205 ntBASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc2Q6PDG5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Gm44124-201ENSMUST00000204159 472 ntBASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc2Q6PDG5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc2Q6PDG5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 Gm15703-201ENSMUST00000120250 880 ntBASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 Gm14760-201ENSMUST00000121831 999 ntBASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.77□□□□□ -0.05
Smarcc2Q6PDG5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms