Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarca2Q6DIC0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm3551-201ENSMUST00000190750 664 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm7537-201ENSMUST00000221660 1414 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm6198-201ENSMUST00000191337 2929 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm13549-201ENSMUST00000118339 796 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 Gm30238-201ENSMUST00000195528 2603 ntBASIC21.65■■□□□ 1.06
Smarca2Q6DIC0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Gm15784-201ENSMUST00000120260 1462 ntBASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarca2Q6DIC0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Gm11836-201ENSMUST00000121022 441 ntBASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Gm38151-201ENSMUST00000195085 289 ntBASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarca2Q6DIC0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Gm12419-201ENSMUST00000116649 636 ntBASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 AC168279.1-201ENSMUST00000214611 382 ntBASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarca2Q6DIC0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm18059-201ENSMUST00000208073 580 ntBASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm5537-201ENSMUST00000091117 1252 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms