Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Gm5051-201ENSMUST00000204085 485 ntBASIC13.97□□□□□ -0.17
Ecm1Q61508 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.97□□□□□ -0.17
Ecm1Q61508 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ecm1Q61508 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Ecm1Q61508 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.96□□□□□ -0.17
Ecm1Q61508 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.96□□□□□ -0.17
Ecm1Q61508 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.96□□□□□ -0.17
Ecm1Q61508 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ecm1Q61508 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Gm14058-201ENSMUST00000116082 735 ntBASIC13.96□□□□□ -0.17
Ecm1Q61508 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.96□□□□□ -0.17
Ecm1Q61508 Gm270-201ENSMUST00000223010 976 ntBASIC13.96□□□□□ -0.17
Ecm1Q61508 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.96□□□□□ -0.17
Ecm1Q61508 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ecm1Q61508 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ecm1Q61508 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ecm1Q61508 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ecm1Q61508 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ecm1Q61508 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.95□□□□□ -0.18
Ecm1Q61508 Gm17827-201ENSMUST00000211825 742 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.95□□□□□ -0.18
Ecm1Q61508 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ecm1Q61508 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms