Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.2□□□□□ -0.3
Smarcd1Q61466 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcd1Q61466 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm14726-201ENSMUST00000120623 896 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm11597-201ENSMUST00000121423 964 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm20482-202ENSMUST00000174729 825 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm37259-201ENSMUST00000193903 849 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.19□□□□□ -0.3
Smarcd1Q61466 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd1Q61466 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm14999-201ENSMUST00000121039 624 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm27320-201ENSMUST00000184892 109 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm31256-201ENSMUST00000194705 506 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.18□□□□□ -0.3
Smarcd1Q61466 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd1Q61466 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd1Q61466 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms