Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm15711-201ENSMUST00000118889 535 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm18734-201ENSMUST00000172937 808 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm9230-201ENSMUST00000188228 532 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm9555-201ENSMUST00000200908 583 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm19994-201ENSMUST00000217086 586 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.43■□□□□ 0.22
Ccne1Q61457 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccne1Q61457 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccne1Q61457 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Mir1943-201ENSMUST00000158276 73 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm5616-201ENSMUST00000165252 384 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm8741-201ENSMUST00000174736 384 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.42■□□□□ 0.22
Ccne1Q61457 AY036118-201ENSMUST00000200021 923 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 Gm45118-201ENSMUST00000208928 825 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ccne1Q61457 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.42■□□□□ 0.22
Ccne1Q61457 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccne1Q61457 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccne1Q61457 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm23949-201ENSMUST00000104027 127 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm27627-201ENSMUST00000183644 150 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm29787-201ENSMUST00000222129 849 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm9996-201ENSMUST00000070359 913 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.41■□□□□ 0.22
Ccne1Q61457 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccne1Q61457 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccne1Q61457 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms