Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm2423-201ENSMUST00000074863 733 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ift88Q61371 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ift88Q61371 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ift88Q61371 Gm13612-201ENSMUST00000119276 390 ntBASIC14□□□□□ -0.17
Ift88Q61371 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14□□□□□ -0.17
Ift88Q61371 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14□□□□□ -0.17
Ift88Q61371 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ift88Q61371 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Gm14608-201ENSMUST00000120030 1553 ntBASIC14□□□□□ -0.17
Ift88Q61371 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ift88Q61371 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ift88Q61371 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.99□□□□□ -0.17
Ift88Q61371 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ift88Q61371 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Ift88Q61371 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Gm23363-201ENSMUST00000175024 79 ntBASIC13.99□□□□□ -0.17
Ift88Q61371 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ift88Q61371 Gm27437-201ENSMUST00000183429 107 ntBASIC13.99□□□□□ -0.17
Ift88Q61371 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Gm8598-201ENSMUST00000221184 836 ntBASIC13.99□□□□□ -0.17
Ift88Q61371 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ift88Q61371 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ift88Q61371 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.99□□□□□ -0.17
Ift88Q61371 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ift88Q61371 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms