Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nr1h4Q60641 Syt7-204ENSMUST00000223586 1344 ntBASIC12.11□□□□□ -0.47
Nr1h4Q60641 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm12151-201ENSMUST00000121374 290 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm12291-201ENSMUST00000121627 311 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Nr1h4Q60641 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.1□□□□□ -0.47
Nr1h4Q60641 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm9630-201ENSMUST00000178304 885 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm18307-201ENSMUST00000206864 949 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm44872-201ENSMUST00000207864 420 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.09□□□□□ -0.47
Nr1h4Q60641 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nr1h4Q60641 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nr1h4Q60641 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nr1h4Q60641 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nr1h4Q60641 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nr1h4Q60641 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms