Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm38092-201ENSMUST00000195600 653 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm11531-201ENSMUST00000117614 555 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm14921-201ENSMUST00000118643 908 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm12997-201ENSMUST00000120207 640 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm5950-201ENSMUST00000213337 772 ntBASIC13.49□□□□□ -0.25
Shroom1Q5SX79 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Shroom1Q5SX79 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm25214-201ENSMUST00000104573 129 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shroom1Q5SX79 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shroom1Q5SX79 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms