Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm16296-201ENSMUST00000159905 325 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm40466-201ENSMUST00000212174 422 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf20Q5DTM8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf20Q5DTM8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf20Q5DTM8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rnf20Q5DTM8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.08■□□□□ 0
Rnf20Q5DTM8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.08■□□□□ 0
Rnf20Q5DTM8 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.08■□□□□ 0
Rnf20Q5DTM8 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.08■□□□□ 0
Rnf20Q5DTM8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.08■□□□□ 0
Rnf20Q5DTM8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf20Q5DTM8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms