Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Gm42518-201ENSMUST00000196277 938 ntBASIC12.73□□□□□ -0.37
Fam196aQ3USH1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fam196aQ3USH1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gm23596-201ENSMUST00000104304 132 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gm11451-201ENSMUST00000118946 630 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gm16296-201ENSMUST00000159905 325 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Gm20392-201ENSMUST00000173047 701 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Mir339-201ENSMUST00000083659 96 ntBASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fam196aQ3USH1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm11801-201ENSMUST00000117807 746 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm13315-201ENSMUST00000120376 991 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm7902-201ENSMUST00000198842 947 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm43962-201ENSMUST00000203898 190 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fam196aQ3USH1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Fam196aQ3USH1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms