Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.37□□□□□ -0.27
Nlrc4Q3UP24 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm13736-201ENSMUST00000119272 253 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm10608-202ENSMUST00000213924 676 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm7046-201ENSMUST00000221351 977 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gm8227-201ENSMUST00000223306 571 ntBASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nlrc4Q3UP24 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm13875-201ENSMUST00000120162 282 ntBASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm8018-201ENSMUST00000173536 789 ntBASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm45331-201ENSMUST00000209868 554 ntBASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gm18935-201ENSMUST00000212692 664 ntBASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Nlrc4Q3UP24 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms