Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 AU022133-201ENSMUST00000200601 873 ntBASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upf3aQ3ULJ3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm42937-201ENSMUST00000197360 752 ntBASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm44100-201ENSMUST00000204329 436 ntBASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upf3aQ3ULJ3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm18734-201ENSMUST00000172937 808 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm29615-201ENSMUST00000185371 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28224-201ENSMUST00000186078 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm29001-201ENSMUST00000186177 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28292-201ENSMUST00000186593 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28101-201ENSMUST00000187608 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm29076-201ENSMUST00000187689 697 ntBASIC13.3□□□□□ -0.28
Upf3aQ3ULJ3 Gm28302-201ENSMUST00000187931 697 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms