Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm29649-201ENSMUST00000185649 419 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm19163-201ENSMUST00000223313 780 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm6091-201ENSMUST00000098307 165 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brf2Q3UAW9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brf2Q3UAW9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Brf2Q3UAW9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms