Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccbe1Q3MI99 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccbe1Q3MI99 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm15770-201ENSMUST00000117498 584 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Ccbe1Q3MI99 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gm25948-201ENSMUST00000175334 112 ntBASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccbe1Q3MI99 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.46□□□□□ -0.57
Ccbe1Q3MI99 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms