Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Gm37365-201ENSMUST00000193109 409 ntBASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Mir339-201ENSMUST00000083659 96 ntBASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Smok4a-201ENSMUST00000074512 1455 ntBASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Gm21358-201ENSMUST00000191645 1659 ntBASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ush2AQ2QI47 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm24933-201ENSMUST00000103762 110 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm23252-201ENSMUST00000103776 110 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm26443-201ENSMUST00000179610 110 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm43117-201ENSMUST00000198531 379 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm42821-201ENSMUST00000199771 489 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm1826-201ENSMUST00000118646 1162 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm20091-201ENSMUST00000179683 189 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm43244-201ENSMUST00000196994 1285 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm44917-201ENSMUST00000208798 520 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 AC164556.1-201ENSMUST00000221318 751 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm12274-201ENSMUST00000120062 385 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm37826-201ENSMUST00000195329 322 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 CT010480.2-201ENSMUST00000225424 737 ntBASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ush2AQ2QI47 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ush2AQ2QI47 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ush2AQ2QI47 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC6.47□□□□□ -1.37
Ush2AQ2QI47 Gm43811-201ENSMUST00000202862 695 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms