Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.28□□□□□ -0.6
Chd8Q09XV5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.27□□□□□ -0.6
Chd8Q09XV5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.27□□□□□ -0.6
Chd8Q09XV5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Chd8Q09XV5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.27□□□□□ -0.6
Chd8Q09XV5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd8Q09XV5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gm14942-201ENSMUST00000119642 336 ntBASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gm16210-201ENSMUST00000122161 610 ntBASIC11.27□□□□□ -0.61
Chd8Q09XV5 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gm27956-201ENSMUST00000175604 260 ntBASIC11.27□□□□□ -0.61
Chd8Q09XV5 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.27□□□□□ -0.61
Chd8Q09XV5 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd8Q09XV5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm11663-201ENSMUST00000117888 290 ntBASIC11.26□□□□□ -0.61
Chd8Q09XV5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Mir341-201ENSMUST00000093593 96 ntBASIC11.26□□□□□ -0.61
Chd8Q09XV5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.26□□□□□ -0.61
Chd8Q09XV5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd8Q09XV5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms