Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.55□□□□□ -0.72
Tff1Q08423 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Tff1Q08423 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Gm11814-201ENSMUST00000119515 929 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Tff1Q08423 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Gm27847-201ENSMUST00000183711 107 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Gm27375-201ENSMUST00000183799 107 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Gm38223-201ENSMUST00000194484 695 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Tff1Q08423 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Tff1Q08423 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tff1Q08423 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.55□□□□□ -0.72
Tff1Q08423 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.55□□□□□ -0.72
Tff1Q08423 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Tff1Q08423 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.54□□□□□ -0.72
Tff1Q08423 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.54□□□□□ -0.72
Tff1Q08423 Gm15429-201ENSMUST00000151268 798 ntBASIC10.54□□□□□ -0.72
Tff1Q08423 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.54□□□□□ -0.72
Tff1Q08423 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Tff1Q08423 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Tff1Q08423 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.54□□□□□ -0.72
Tff1Q08423 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.54□□□□□ -0.72
Tff1Q08423 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Tff1Q08423 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tff1Q08423 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms