Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm13665-201ENSMUST00000120830 528 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm2546-201ENSMUST00000182630 991 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Mir6979-201ENSMUST00000183927 56 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 AA914427-201ENSMUST00000193194 1166 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf1Q07802 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.86□□□□□ -0.35
Ebf1Q07802 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm12176-201ENSMUST00000121420 875 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm13570-201ENSMUST00000140763 309 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms