Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sox4Q06831 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.48□□□□□ -0.41
Sox4Q06831 Gm15370-201ENSMUST00000117158 253 ntBASIC12.48□□□□□ -0.41
Sox4Q06831 Gm15198-201ENSMUST00000117283 177 ntBASIC12.48□□□□□ -0.41
Sox4Q06831 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.48□□□□□ -0.41
Sox4Q06831 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox4Q06831 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sox4Q06831 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox4Q06831 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Sox4Q06831 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Sox4Q06831 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox4Q06831 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Gm37489-201ENSMUST00000191883 159 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Gm6334-201ENSMUST00000207083 228 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox4Q06831 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox4Q06831 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox4Q06831 Olfr582-201ENSMUST00000098212 960 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.47□□□□□ -0.41
Sox4Q06831 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox4Q06831 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox4Q06831 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Sox4Q06831 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.46□□□□□ -0.41
Sox4Q06831 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.46□□□□□ -0.41
Sox4Q06831 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.46□□□□□ -0.41
Sox4Q06831 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox4Q06831 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Sox4Q06831 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox4Q06831 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox4Q06831 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.46□□□□□ -0.41
Sox4Q06831 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms