Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm12859-201ENSMUST00000117834 427 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm8099-201ENSMUST00000200510 742 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.04□□□□□ -0.48
Cxcr5Q04683 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcr5Q04683 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm13123-201ENSMUST00000122173 492 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm23363-201ENSMUST00000175024 79 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm27390-201ENSMUST00000184516 176 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm38671-201ENSMUST00000200573 130 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Gm8463-201ENSMUST00000208573 613 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.03□□□□□ -0.48
Cxcr5Q04683 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcr5Q04683 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms