Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.86□□□□□ -0.67
Smn1P97801 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.86□□□□□ -0.67
Smn1P97801 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.86□□□□□ -0.67
Smn1P97801 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.86□□□□□ -0.67
Smn1P97801 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.86□□□□□ -0.67
Smn1P97801 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.85□□□□□ -0.67
Smn1P97801 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Gm24694-201ENSMUST00000180054 110 ntBASIC10.85□□□□□ -0.67
Smn1P97801 Gm5354-201ENSMUST00000182417 973 ntBASIC10.85□□□□□ -0.67
Smn1P97801 Gm27663-201ENSMUST00000184839 110 ntBASIC10.85□□□□□ -0.67
Smn1P97801 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.85□□□□□ -0.67
Smn1P97801 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.85□□□□□ -0.67
Smn1P97801 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Smn1P97801 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smn1P97801 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smn1P97801 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Gm15371-201ENSMUST00000117057 784 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.84□□□□□ -0.67
Smn1P97801 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Smn1P97801 Gm37935-201ENSMUST00000192012 982 ntBASIC10.84□□□□□ -0.67
Smn1P97801 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.84□□□□□ -0.67
Smn1P97801 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Smn1P97801 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.84□□□□□ -0.67
Smn1P97801 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.84□□□□□ -0.67
Smn1P97801 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smn1P97801 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smn1P97801 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms