Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm6447-201ENSMUST00000118905 835 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm11814-201ENSMUST00000119515 929 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Mir1938-201ENSMUST00000158746 100 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm27847-201ENSMUST00000183711 107 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm27375-201ENSMUST00000183799 107 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Pck2-205ENSMUST00000226352 2784 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.92□□□□□ -0.34
Thumpd3P97770 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.91□□□□□ -0.34
Thumpd3P97770 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm12742-201ENSMUST00000117326 410 ntBASIC12.91□□□□□ -0.34
Thumpd3P97770 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm8652-201ENSMUST00000181363 964 ntBASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.91□□□□□ -0.34
Thumpd3P97770 Gm26315-201ENSMUST00000083890 321 ntBASIC12.91□□□□□ -0.34
Thumpd3P97770 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.91□□□□□ -0.34
Thumpd3P97770 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thumpd3P97770 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.9□□□□□ -0.34
Thumpd3P97770 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Gm44397-201ENSMUST00000195950 113 ntBASIC12.9□□□□□ -0.34
Thumpd3P97770 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.9□□□□□ -0.34
Thumpd3P97770 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms