Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps45P97390 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps45P97390 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps45P97390 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps45P97390 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps45P97390 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps45P97390 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps45P97390 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.13□□□□□ -0.31
Vps45P97390 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.13□□□□□ -0.31
Vps45P97390 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps45P97390 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps45P97390 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Mir339-201ENSMUST00000083659 96 ntBASIC13.13□□□□□ -0.31
Vps45P97390 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps45P97390 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps45P97390 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.13□□□□□ -0.31
Vps45P97390 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.13□□□□□ -0.31
Vps45P97390 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps45P97390 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vps45P97390 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Vps45P97390 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Vps45P97390 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps45P97390 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Gm4986-201ENSMUST00000119731 549 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps45P97390 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps45P97390 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps45P97390 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vps45P97390 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps45P97390 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps45P97390 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Rps4l-202ENSMUST00000204242 789 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Gm7046-201ENSMUST00000221351 977 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Gm19163-201ENSMUST00000223313 780 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.12□□□□□ -0.31
Vps45P97390 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps45P97390 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps45P97390 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps45P97390 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.11□□□□□ -0.31
Vps45P97390 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps45P97390 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms