Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Lig3P97386 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Lig3P97386 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.88□□□□□ -0.19
Lig3P97386 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.88□□□□□ -0.19
Lig3P97386 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Lig3P97386 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.88□□□□□ -0.19
Lig3P97386 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lig3P97386 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 Gm15782-201ENSMUST00000121073 445 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.87□□□□□ -0.19
Lig3P97386 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lig3P97386 Gm6222-202ENSMUST00000182143 629 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Lig3P97386 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Gm26315-201ENSMUST00000083890 321 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.87□□□□□ -0.19
Lig3P97386 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.87□□□□□ -0.19
Lig3P97386 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lig3P97386 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lig3P97386 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms