Protein–RNA interactions for Protein: P80206

Otx2, Homeobox protein OTX2, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx2P80206 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.74□□□□□ -0.53
Otx2P80206 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otx2P80206 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otx2P80206 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Otx2P80206 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Otx2P80206 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Gm14130-201ENSMUST00000118417 987 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Gm13736-201ENSMUST00000119272 253 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Gm14277-201ENSMUST00000121195 360 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.73□□□□□ -0.53
Otx2P80206 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.73□□□□□ -0.53
Otx2P80206 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Rps4l-202ENSMUST00000204242 789 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.73□□□□□ -0.53
Otx2P80206 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.73□□□□□ -0.53
Otx2P80206 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.73□□□□□ -0.53
Otx2P80206 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.73□□□□□ -0.53
Otx2P80206 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.73□□□□□ -0.53
Otx2P80206 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.73□□□□□ -0.53
Otx2P80206 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Otx2P80206 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Otx2P80206 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Otx2P80206 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Otx2P80206 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Otx2P80206 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Otx2P80206 Gm14109-201ENSMUST00000118814 309 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm2260-201ENSMUST00000184965 657 ntBASIC11.72□□□□□ -0.53
Otx2P80206 AA914427-201ENSMUST00000193194 1166 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Gm18753-201ENSMUST00000201000 566 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Otx2P80206 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Otx2P80206 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.72□□□□□ -0.53
Otx2P80206 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Otx2P80206 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Otx2P80206 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms