Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Smad1P70340 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Gm11803-201ENSMUST00000119966 444 ntBASIC13.09□□□□□ -0.31
Smad1P70340 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.09□□□□□ -0.31
Smad1P70340 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.09□□□□□ -0.31
Smad1P70340 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.09□□□□□ -0.31
Smad1P70340 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.09□□□□□ -0.31
Smad1P70340 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Gm43822-201ENSMUST00000200285 476 ntBASIC13.09□□□□□ -0.31
Smad1P70340 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.09□□□□□ -0.31
Smad1P70340 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.09□□□□□ -0.31
Smad1P70340 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Smad1P70340 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smad1P70340 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smad1P70340 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smad1P70340 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smad1P70340 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.08□□□□□ -0.32
Smad1P70340 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.08□□□□□ -0.32
Smad1P70340 Gm38266-201ENSMUST00000194931 421 ntBASIC13.08□□□□□ -0.32
Smad1P70340 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.08□□□□□ -0.32
Smad1P70340 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Smad1P70340 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smad1P70340 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smad1P70340 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.07□□□□□ -0.32
Smad1P70340 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Mir8109-201ENSMUST00000184375 117 ntBASIC13.07□□□□□ -0.32
Smad1P70340 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Gm6458-201ENSMUST00000211573 635 ntBASIC13.07□□□□□ -0.32
Smad1P70340 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.07□□□□□ -0.32
Smad1P70340 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.07□□□□□ -0.32
Smad1P70340 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Gm9823-201ENSMUST00000051212 327 ntBASIC13.07□□□□□ -0.32
Smad1P70340 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms