Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf6P70196 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf6P70196 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf6P70196 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.52□□□□□ -0.41
Traf6P70196 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf6P70196 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Daam2-202ENSMUST00000224595 1926 ntBASIC12.51□□□□□ -0.41
Traf6P70196 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Gm13612-201ENSMUST00000119276 390 ntBASIC12.51□□□□□ -0.41
Traf6P70196 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC12.51□□□□□ -0.41
Traf6P70196 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf6P70196 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.51□□□□□ -0.41
Traf6P70196 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.51□□□□□ -0.41
Traf6P70196 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.51□□□□□ -0.41
Traf6P70196 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.51□□□□□ -0.41
Traf6P70196 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Traf6P70196 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Traf6P70196 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf6P70196 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf6P70196 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Traf6P70196 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.5□□□□□ -0.41
Traf6P70196 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Traf6P70196 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.5□□□□□ -0.41
Traf6P70196 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.5□□□□□ -0.41
Traf6P70196 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.5□□□□□ -0.41
Traf6P70196 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.5□□□□□ -0.41
Traf6P70196 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf6P70196 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf6P70196 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf6P70196 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf6P70196 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Traf6P70196 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Traf6P70196 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Traf6P70196 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Traf6P70196 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Gm11618-201ENSMUST00000117946 267 ntBASIC12.49□□□□□ -0.41
Traf6P70196 Gm13813-201ENSMUST00000120998 787 ntBASIC12.49□□□□□ -0.41
Traf6P70196 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.49□□□□□ -0.41
Traf6P70196 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.49□□□□□ -0.41
Traf6P70196 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.49□□□□□ -0.41
Traf6P70196 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf6P70196 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms