Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six5P70178 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six5P70178 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Six5P70178 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.88□□□□□ -0.51
Six5P70178 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Gm27514-201ENSMUST00000183692 110 ntBASIC11.88□□□□□ -0.51
Six5P70178 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Gm38092-201ENSMUST00000195600 653 ntBASIC11.88□□□□□ -0.51
Six5P70178 Gm18062-201ENSMUST00000208020 547 ntBASIC11.88□□□□□ -0.51
Six5P70178 Gm18055-201ENSMUST00000208254 547 ntBASIC11.88□□□□□ -0.51
Six5P70178 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Six5P70178 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Six5P70178 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Six5P70178 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Six5P70178 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.88□□□□□ -0.51
Six5P70178 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six5P70178 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.87□□□□□ -0.51
Six5P70178 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.87□□□□□ -0.51
Six5P70178 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.87□□□□□ -0.51
Six5P70178 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.87□□□□□ -0.51
Six5P70178 Gm11425-201ENSMUST00000119608 498 ntBASIC11.87□□□□□ -0.51
Six5P70178 Gm11591-201ENSMUST00000120063 702 ntBASIC11.87□□□□□ -0.51
Six5P70178 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Six5P70178 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Gm5781-201ENSMUST00000219792 443 ntBASIC11.87□□□□□ -0.51
Six5P70178 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.87□□□□□ -0.51
Six5P70178 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Gm9396-201ENSMUST00000076703 567 ntBASIC11.87□□□□□ -0.51
Six5P70178 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.87□□□□□ -0.51
Six5P70178 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.87□□□□□ -0.51
Six5P70178 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Six5P70178 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Six5P70178 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.87□□□□□ -0.51
Six5P70178 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Six5P70178 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six5P70178 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Six5P70178 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Six5P70178 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Six5P70178 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Six5P70178 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six5P70178 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.86□□□□□ -0.51
Six5P70178 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms