Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Gm7584-201ENSMUST00000175829 940 ntBASIC12.46□□□□□ -0.41
Lhx1P63006 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx1P63006 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx1P63006 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.46□□□□□ -0.41
Lhx1P63006 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.46□□□□□ -0.41
Lhx1P63006 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lhx1P63006 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lhx1P63006 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx1P63006 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.45□□□□□ -0.42
Lhx1P63006 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm11531-201ENSMUST00000117614 555 ntBASIC12.45□□□□□ -0.42
Lhx1P63006 Gm13875-201ENSMUST00000120162 282 ntBASIC12.45□□□□□ -0.42
Lhx1P63006 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.45□□□□□ -0.42
Lhx1P63006 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.45□□□□□ -0.42
Lhx1P63006 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.45□□□□□ -0.42
Lhx1P63006 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.45□□□□□ -0.42
Lhx1P63006 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lhx1P63006 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lhx1P63006 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx1P63006 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lhx1P63006 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Gm22323-201ENSMUST00000103832 109 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Gm25668-201ENSMUST00000157700 129 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lhx1P63006 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.44□□□□□ -0.42
Lhx1P63006 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lhx1P63006 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms