Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.03□□□□□ -0.96
Rpl39P62892 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm26464-201ENSMUST00000157094 305 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Rpl39P62892 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm27430-201ENSMUST00000184585 107 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm44333-201ENSMUST00000197168 107 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rpl39P62892 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.03□□□□□ -0.96
Rpl39P62892 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 Gm26315-201ENSMUST00000083890 321 ntBASIC9.03□□□□□ -0.96
Rpl39P62892 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.03□□□□□ -0.96
Rpl39P62892 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rpl39P62892 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rpl39P62892 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Rpl39P62892 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rpl39P62892 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Rpl39P62892 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Rpl39P62892 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.02□□□□□ -0.97
Rpl39P62892 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
Rpl39P62892 Gm27397-201ENSMUST00000184997 107 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.02□□□□□ -0.97
Rpl39P62892 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Chchd1-203ENSMUST00000224633 557 ntBASIC9.02□□□□□ -0.97
Rpl39P62892 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.02□□□□□ -0.97
Rpl39P62892 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Rpl39P62892 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Rpl39P62892 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.02□□□□□ -0.97
Rpl39P62892 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rpl39P62892 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rpl39P62892 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms