Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Gm44346-201ENSMUST00000198851 141 ntBASIC10.67□□□□□ -0.7
Gabra1P62812 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Gabra1P62812 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.67□□□□□ -0.7
Gabra1P62812 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gabra1P62812 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.67□□□□□ -0.7
Gabra1P62812 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gabra1P62812 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gabra1P62812 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.67□□□□□ -0.7
Gabra1P62812 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.67□□□□□ -0.7
Gabra1P62812 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gabra1P62812 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gabra1P62812 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.66□□□□□ -0.7
Gabra1P62812 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.66□□□□□ -0.7
Gabra1P62812 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.66□□□□□ -0.7
Gabra1P62812 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gabra1P62812 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.66□□□□□ -0.7
Gabra1P62812 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Gabra1P62812 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Gabra1P62812 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Gabra1P62812 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.66□□□□□ -0.7
Gabra1P62812 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.66□□□□□ -0.7
Gabra1P62812 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.66□□□□□ -0.7
Gabra1P62812 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gabra1P62812 Gm5161-201ENSMUST00000075243 853 ntBASIC10.66□□□□□ -0.7
Gabra1P62812 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Gabra1P62812 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gabra1P62812 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Gabra1P62812 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Gabra1P62812 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Gabra1P62812 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.65□□□□□ -0.7
Gabra1P62812 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Gabra1P62812 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Gabra1P62812 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Gabra1P62812 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gabra1P62812 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.65□□□□□ -0.7
Gabra1P62812 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Gabra1P62812 Gm25911-201ENSMUST00000157621 56 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Gm24513-201ENSMUST00000174964 138 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Gm9630-201ENSMUST00000178304 885 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Gm25144-201ENSMUST00000179561 110 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Gm25352-201ENSMUST00000179815 110 ntBASIC10.65□□□□□ -0.7
Gabra1P62812 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms