Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm19220-201ENSMUST00000222682 803 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gm22189-201ENSMUST00000103822 86 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gm12859-201ENSMUST00000117834 427 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Sf3b6P59708 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.26□□□□□ -0.61
Sf3b6P59708 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3b6P59708 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sf3b6P59708 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Gm42599-201ENSMUST00000201308 469 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms