Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Tpm2P58774 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Tpm2P58774 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm12403-201ENSMUST00000121384 959 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.59□□□□□ -0.07
Tpm2P58774 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.59□□□□□ -0.07
Tpm2P58774 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tpm2P58774 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Gm2128-201ENSMUST00000108009 2560 ntBASIC14.59□□□□□ -0.07
Tpm2P58774 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm2P58774 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.58□□□□□ -0.07
Tpm2P58774 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Tpm2P58774 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tpm2P58774 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.58□□□□□ -0.07
Tpm2P58774 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tpm2P58774 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Tpm2P58774 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Tpm2P58774 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tpm2P58774 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Tpm2P58774 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.58□□□□□ -0.08
Tpm2P58774 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tpm2P58774 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tpm2P58774 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.57□□□□□ -0.08
Tpm2P58774 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tpm2P58774 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Tpm2P58774 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tpm2P58774 Gm9522-201ENSMUST00000182394 926 ntBASIC14.57□□□□□ -0.08
Tpm2P58774 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.57□□□□□ -0.08
Tpm2P58774 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.57□□□□□ -0.08
Tpm2P58774 Gm20445-201ENSMUST00000061905 565 ntBASIC14.57□□□□□ -0.08
Tpm2P58774 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms