Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rrp1P56183 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm12928-201ENSMUST00000117115 573 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm22121-201ENSMUST00000175148 54 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 Mir6392-201ENSMUST00000184924 108 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.29□□□□□ -0.12
Rrp1P56183 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm8598-201ENSMUST00000221184 836 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rrp1P56183 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp1P56183 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.29□□□□□ -0.12
Rrp1P56183 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp1P56183 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.28□□□□□ -0.12
Rrp1P56183 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Gm18018-201ENSMUST00000198273 408 ntBASIC14.28□□□□□ -0.12
Rrp1P56183 Gm9794-201ENSMUST00000202370 423 ntBASIC14.28□□□□□ -0.12
Rrp1P56183 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.28□□□□□ -0.12
Rrp1P56183 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.28□□□□□ -0.12
Rrp1P56183 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rrp1P56183 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.28□□□□□ -0.12
Rrp1P56183 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp1P56183 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Rrp1P56183 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.27□□□□□ -0.12
Rrp1P56183 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.27□□□□□ -0.12
Rrp1P56183 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.27□□□□□ -0.12
Rrp1P56183 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Rrp1P56183 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp1P56183 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp1P56183 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rrp1P56183 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp1P56183 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rrp1P56183 Gm8099-201ENSMUST00000200510 742 ntBASIC14.27□□□□□ -0.13
Rrp1P56183 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.27□□□□□ -0.13
Rrp1P56183 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.27□□□□□ -0.13
Rrp1P56183 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp1P56183 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.27□□□□□ -0.13
Rrp1P56183 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rrp1P56183 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms