Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Sox1P53783 Gm5340-201ENSMUST00000203733 880 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox1P53783 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Sox1P53783 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox1P53783 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox1P53783 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Sox1P53783 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Gm22133-201ENSMUST00000102082 109 ntBASIC12.92□□□□□ -0.34
Sox1P53783 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox1P53783 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.92□□□□□ -0.34
Sox1P53783 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Sox1P53783 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.92□□□□□ -0.34
Sox1P53783 Gm3619-201ENSMUST00000219947 775 ntBASIC12.92□□□□□ -0.34
Sox1P53783 Gm19009-201ENSMUST00000223072 823 ntBASIC12.92□□□□□ -0.34
Sox1P53783 Gm14005-208ENSMUST00000223654 681 ntBASIC12.92□□□□□ -0.34
Sox1P53783 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.92□□□□□ -0.34
Sox1P53783 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox1P53783 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox1P53783 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.91□□□□□ -0.34
Sox1P53783 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Gm8199-201ENSMUST00000121323 823 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.91□□□□□ -0.34
Sox1P53783 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox1P53783 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox1P53783 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms