Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.17□□□□□ -0.46
Ube2e3P52483 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube2e3P52483 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2e3P52483 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm5745-201ENSMUST00000183748 313 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm26035-201ENSMUST00000083065 308 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.16□□□□□ -0.46
Ube2e3P52483 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube2e3P52483 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2e3P52483 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm16296-201ENSMUST00000159905 325 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm9630-201ENSMUST00000178304 885 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Gm6266-201ENSMUST00000203844 806 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.15□□□□□ -0.46
Ube2e3P52483 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.15□□□□□ -0.46
Ube2e3P52483 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.15□□□□□ -0.46
Ube2e3P52483 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ube2e3P52483 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.15□□□□□ -0.47
Ube2e3P52483 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ube2e3P52483 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms